Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831505.1_cds_XP_016504543.1_17976
CDS Infomation

[gene=LOC107822502] [db_xref=GeneID:107822502] [protein=(-)-germacrene D synthase-like] [protein_id=XP_016504543.1] [location=complement(join(31336..31564,34336..34598,35044..35292,35381..35519,35645..35866,35969..36338,36422..36701,37066..37158))] [gbkey=CDS]
Sequence

ATGGATGGGAATGCTGGAGAAGTTAAACGGCGGTGTGACAATCATCATCCTACTGTTTGG
GGAGACCATTTTCTTGCCTATGCTCATCTCTCGGGAGCCAATGAATGGGAAGAGAAGGAA
CATGAAGTCCTAAAAGAAGAAGTGAGAAAAATGCTAGAGATGGCTAGTTCTAAATCTTTG
CAAAATCTTGACCTAATAAACGCAATCCAATGTCTTGGAGTAGCGTACCATTTTGAACAT
GAGATTTTGAAATCATTGGCCTACATTTGCAATTGTTATGAAGAATTGAATGGTGAAGCT
GATGAAACTGACCTCCATCTTGTTGCTCTGCGGTTTCGATTACTTAGGCAACACGGTTAT
TATGTCTCGTCTGATGTTTTTAGGAAGTTCACTGATGACCAAGGAAATTACAACAAAGCA
TTGGTTAGCGACGTGCAAGGATTGTTGAGCTTATTTGAGGCAGCACAATTCAGAGTACAC
GGGGAAGAAATACTGGACGAAGCAGATAATTTCACCACCACTCATTTGAAGCTAATGTTG
CCTACATTGAGAAATTCTCTCGCGATGCAGGTCACGAATGCACTAAAGTATCCAATCAAC
TATACTATAACGACGGTAGCGACGAGGAAATACATATCATTTTACCAAGAAGATAATTGT
GATGAAACGTTACTAAATTTCGCAAAATTGGACTTCAACATATTGCAGAAAATGCATAAA
AGGGAACTATGTGATATCACAAGGTGGTGGAAAGAATTGGACTTCGCAAAAGCATTACCT
TTTGCAAGAGACAGAATAATCGAGTTGTACTTCTGGAGTTTGGGTGTGTACAGCTTTGAG
CCCCAGTATAGGGTTGCCAGAAACATAAGTACCAAAATCTTATGCTTCGTTTCTGTTACT
GACGATATCTATGATACCTATGGAAAACTAGATGAACTTACTCTCCTCACGAATGCAATA
GAAAGGTGGAATACCGATGCTGCAGAACAGTTACCGTCATATATGAAGTTTTTTTACCGT
GCACTTCTAGATATTTACGATCAAGTGGAGAAAGAATTGGCAGGTGATAACAAGTCATTT
CGAGTCAACTATTCTATAGCTGCGATGAAAAAGTTGATAAATGCATATTTTCAAGAGGCC
GAATGGTATCATGGGAATAAAATCCCAACAATGGAACAGTATGTGAAGAATGGAATTCGA
TCTAGCACTATCCCATGTCTTGCGACTCTCTCTTGGTTATGCATGGGAAATGAAGCAACG
AAGGAGGCATACGATTGGATTGCAAGTGAACCTCCACTTCTCGTTGCTTCCTCTATAATT
GGTAGATTATCGAATGATATTGTTTCACATGAGAGAGAAGTAGAAAGAGGAGATGTATCA
GGTGTAGAGTGTTACATGAACGAATATGGTGTCACAAAGGAAGAAGCATGCACAGAGATT
AGGAAAATATTGGAGAGTAAATGGAAGGATTTGAATCGAGGATGCCTAGAACCTACCGAT
GTACCAAAAGTTTTGCTAATGCCAGTGCTCAACCTTGCTAGGATGTGTGAGTTCGCATAT
AAAGATGAAGATTCTTATACAGTTTCCCAAAATAACTTTAGAGACATCGTTTCTNTAGCA
GAATCCTGGCACATGACAGCCCCAGAAACTCGAGCAAAATCCAAAAAGAAAAATGTCAAA
AAATTGGAGACCCAGTTGCACAGTTACATGGCAGAAACAAATAAGAAAGTAGATTCTACT
GATTCCAAAATGGATGATCTAAACCACAAAATTGATGTCATGATGGACAAGTTGTTCGTG
AACAAGGATGGAATCCTTGGTAGTGCTCCAGTTGAGGCTCATTAA

Peptide Sequence

PEP ID

XP_016504543.1
PEP Infomation

PREDICTED: (-)-germacrene D synthase-like [Nicotiana tabacum]
Sequence

MDGNAGEVKRRCDNHHPTVWGDHFLAYAHLSGANEWEEKEHEVLKEEVRKMLEMASSKSL
QNLDLINAIQCLGVAYHFEHEILKSLAYICNCYEELNGEADETDLHLVALRFRLLRQHGY
YVSSDVFRKFTDDQGNYNKALVSDVQGLLSLFEAAQFRVHGEEILDEADNFTTTHLKLML
PTLRNSLAMQVTNALKYPINYTITTVATRKYISFYQEDNCDETLLNFAKLDFNILQKMHK
RELCDITRWWKELDFAKALPFARDRIIELYFWSLGVYSFEPQYRVARNISTKILCFVSVT
DDIYDTYGKLDELTLLTNAIERWNTDAAEQLPSYMKFFYRALLDIYDQVEKELAGDNKSF
RVNYSIAAMKKLINAYFQEAEWYHGNKIPTMEQYVKNGIRSSTIPCLATLSWLCMGNEAT
KEAYDWIASEPPLLVASSIIGRLSNDIVSHEREVERGDVSGVECYMNEYGVTKEEACTEI
RKILESKWKDLNRGCLEPTDVPKVLLMPVLNLARMCEFAYKDEDSYTVSQNNFRDIVSXA
ESWHMTAPETRAKSKKKNVKKLETQLHSYMAETNKKVDSTDSKMDDLNHKIDVMMDKLFV
NKDGILGSAPVEAH

Transcript Sequence

Gene sequence data has not been registered.